organoid_tracker.comparison.lineage_comparison module

Compares two sets of links on the lineage level. Things like missed cell divisions and cell deaths will be reported.

organoid_tracker.comparison.lineage_comparison.compare_links(ground_truth: Experiment, scratch: Experiment, max_distance_um: float = 5) → ComparisonReport

Compares two sets of links on the lineage level. Things like missed cell divisions and cell deaths will be reported.