organoid_tracker.visualizer.cell_compartment_visualizer module

class organoid_tracker.visualizer.cell_compartment_visualizer.CellCompartmentVisualizer(window: ~organoid_tracker.gui.window.Window, parent_viewer: ~typing.Type[~organoid_tracker.visualizer.Visualizer] = <class 'organoid_tracker.visualizer.standard_image_visualizer.StandardImageVisualizer'>)

Bases: ExitableImageVisualizer

Divides the tissue into a dividing and a non-dividing compartment. A cell belongs to the dividing compartment (green) if it divides, or one of its neighbors divides. A cell belongs to the non-dividing compartment (blue) if we know that cell does not divide, and no divisions are found in the neighbors. Other cells are drawn in black.