organoid_tracker.util.run_script_creator module

organoid_tracker.util.run_script_creator.create_run_script(output_folder: str, command_name: str)

If you have a plugin that uses get_commands to register commands, then you can call this method to create a BAT or SH file that calls that command. This will create those files, along with a config file pointing to the current plugin directory.

organoid_tracker.util.run_script_creator.find_conda_batch_file() → str

Finds the path to ‘conda.bat’ for activating conda environments on Windows.

organoid_tracker.util.run_script_creator.find_conda_environment_name() → str

Finds the name of the current conda environment.