organoid_tracker.core.full_position_snapshot module

class organoid_tracker.core.full_position_snapshot.FullPositionSnapshot(position: Position, links: List[Position], connections: List[Position], position_data: Dict[str, float | int | str | bool | List[float] | List[int] | List[str] | List[bool]])

Bases: NamedTuple

Represents a snapshot of all information of a position in a single class. This is useful if you want to restore a previous state.

connections: List[Position]: Alias for field number 2

static from_position(experiment: Experiment, position: Position) → FullPositionSnapshot: Gets a snapshot of all information of a position.

static just_position(position: Position) → FullPositionSnapshot: Creates a particle for a position that has no known shape, no links and no data.

links: List[Position]: Alias for field number 1

position: Position: Alias for field number 0

position_data: Dict[str, float | int | str | bool | List[float] | List[int] | List[str] | List[bool]]: Alias for field number 3

static position_with_links(position: Position, *, links: List[Position]) → FullPositionSnapshot: Creates a particle for a position that has no known data, but that has links to the given positions.

restore(experiment: Experiment): Restores a position, its shape, its metadata and its links.